Ing. Michal Bartoš, Ph.D.

research fellow

bartos@utia.cas.cz 266052451

Department: Department of Image Processing

Research interests: Signal/image deconvolution, Perfusion imaging, Practical optimization, Medical imaging

Biography

Publication list

Publications:

See my ResearcherID profile to get list of publications.

Michal Bartoš received his M.Sc. degree in biomedical engineering from the Brno University of Technology, Brno, Czech Republic in 2007 followed by the Ph.D. in 2015. He was on a one-year postdoctoral stay in the Institute of Medical Engineering at the Technical University Graz, Graz, Austria in 2018/2019.

Projects:

AISEE - Artificial Intelligence based Search Environment for video/photo - 01.01.2022 - 31.12.2025
Bayesian methods for non-linear blind inverse problems - 01.01.2020 - 31.12.2022
ASSISLT - Automated Software System in Speech-language Therapy - 01.01.2018 - 31.12.2019
Image reconstruction techniques in magnetic resonance perfusion imaging - 01.01.2018 - 31.5.2019
Magnetic resonance perfusion imaging using compressed sensing - 01.01.2016 - 31.12.2018
Early ultrasound detection of breast cancer - 01.07.2014 - 31.12.2017
Perfusion Analysis Using MRI and Ultrasound - 01.01.2012 - 31.12.2014
Tools for imaging device identification, authentication, and image reconstruction - 01.01.2010 - 31.12.2013
Improvement of diagnostic value in dynamic contrast enhanced imaging using MRI and ultrasonography in medicine - 01.01.2009 - 31.12.2011

Journal articles

Shalom E. S., Kim H., van Der Heijden R. A., Ahmed Z., Patel R., Hormuth D. A., DiCarlo J. C., Yankeelov T. E., Sisco N. J., Dortch R. D., Stokes A. M., Inglese M., Grech-Sollars M., Toschi N., Sahoo P., Singh A., Verma S. K., Rathore D. K., Kazerouni A. S., Partridge S. C., LoCastro E., Paudyal R., Wolansky I. A., Shukla-Dave A., Schouten P., Gurney-Champion O. J., Jiřík Radovan, Macíček Ondřej, Bartoš Michal, Vitouš Jiří: The ISMRM Open Science Initiative for Perfusion Imaging (OSIPI): Results from the OSIPI-Dynamic Contrast-Enhanced challenge, Magnetic Resonance in Medicine 91 5 (2024), p. 1803-1821 Download DOI: 10.1002/mrm.29909 [2024]
Kratochvíla Jiří, Jiřík Radovan, Bartoš Michal, Standara M., Starčuk jr. Zenon, Taxt T.: Blind deconvolution decreases requirements on temporal resolution of DCE-MRI: Application to 2nd generation pharmacokinetic modeling, Magnetic Resonance Imaging 109, p. 238-248 Download DOI: 10.1016/j.mri.2024.03.019 [2024]
Jiřík Radovan, Taxt T., Macíček Ondřej, Bartoš Michal, Kratochvíla Jiří, Souček Karel, Dražanová Eva, Krátká Lucie, Hampl A., Starčuk jr. Zenon: Blind deconvolution estimation of an arterial input function for small animal DCE-MRI, Magnetic Resonance Imaging 62, p. 46-56 Download DOI: 10.1016/j.mri.2019.05.024 [2019]
Bartoš Michal, Rajmic P., Šorel Michal, Mangová M., Keunen O., Jiřík Radovan: Spatially regularized estimation of the tissue homogeneity model parameters in DCE‐MRI using proximal minimization, Magnetic Resonance in Medicine 82 6 (2019), p. 2257-2272 Download DOI: 10.1002/mrm.27874 [2019]
Šroubek Filip, Bartoš Michal, Schier Jan, Bílková Zuzana, Zitová Barbara, Vydra J., Macová I., Daneš J., Lambert L.: A computer-assisted system for handheld whole-breast ultrasonography, International Journal of Computer Assisted Radiology and Surgery 14 3 (2019), p. 509-516 Download Download DOI: 10.1007/s11548-018-01909-7 [2019]
Macíček Ondřej, Jiřík Radovan, Mikulka J., Bartoš Michal, Šprláková A., Keřkovský M., Starčuk jr. Zenon, Bartušek Karel, Taxt T.: Time-Efficient Perfusion Imaging Using DCE- and DSC-MRI, Measurement Science Review 18 6 (2018), p. 262-271 DOI: 10.1515/msr-2018-0036 [2018]
Šorel Michal, Bartoš Michal: Fast Bayesian JPEG Decompression and Denoising With Tight Frame Priors, IEEE Transactions on Image Processing 26 1 (2017), p. 490-501 Download DOI: 10.1109/TIP.2016.2627802 [2017]
Kamenický Jan, Bartoš Michal, Flusser Jan, Mahdian Babak, Kotera Jan, Novozámský Adam, Saic Stanislav, Šroubek Filip, Šorel Michal, Zita Aleš, Zitová Barbara, Šíma Z., Švarc P., Hořínek J.: PIZZARO: Forensic analysis and restoration of image and video data, Forensic Science International 264 1 (2016), p. 153-166 Download DOI: 10.1016/j.forsciint.2016.04.027 [2016]
Bartoš Michal, Jiřík Radovan, Kratochvíla Jiří, Standara M., Starčuk jr. Zenon, Torfinn T.: The precision of DCE-MRI using the tissue homogeneity model with continuous formulation of the perfusion parameters, Magnetic Resonance Imaging 32 5 (2014), p. 505-513 DOI: 10.1016/j.mri.2014.02.003 [2014]

Other publications

Bílková Zuzana, Bartoš Michal, Dominec Adam, Greško Šimon, Novozámský Adam, Zitová Barbara, Paroubková Markéta: ASSISLT: Computer-aided speech therapy tool, Signal Processing : A publication of the European Association for Signal Processing (EURASIP), p. 598-602 Download DOI: 10.23919/EUSIPCO55093.2022.9909627 [2022]
Bílková Zuzana, Novozámský Adam, Bartoš Michal, Dominec Adam, Greško Šimon, Zitová Barbara, Paroubková Markéta, Flusser Jan: Human Computer Interface Based on Tongue and Lips Movements and its Application for Speech Therapy System, Electronic Imaging, Visualization and Data Analysis 2020 Download DOI: 10.2352/ISSN.2470-1173.2020.1.VDA-389 [2020]
Bartoš Michal, Maier O., Stollberger R., Jiřík Radovan: Comparison of fitting approaches in dynamic contrast enhanced magnetic resonance imaging : direct estimation from raw k-space signals vs. conventional approach from concentration–time curves, Magnetic Resonance Materials in Physics, Biology and Medicine, p. 348-349 Download DOI: 10.1007/s10334-019-00755-1 [2019]
Walner Hynek, Bartoš Michal, Mangová M., Keunen O., Bjerkvig R., Jiřík Radovan, Šorel Michal: Iterative Methods for Fast Reconstruction of Undersampled Dynamic Contrast-Enhanced MRI Data, World Congress on Medical Physics and Biomedical Engineering 2018, p. 267-271, Eds: Lhotská L., Sukupová L., Lacković I., Ibbott G.S. Download DOI: 10.1007/978-981-10-9035-6_48 [2019]
Bartoš Michal, Šorel Michal, Jiřík Radovan: Time-efficient Fourier domain evaluation of pharmacokinetic model in dynamic contrast-enhanced magnetic resonance imaging, IFMBE Proceedings, Volume 68, Issue 1, p. 777-781 Download DOI: 10.1007/978-981-10-9035-6_143 [2019]
Bartoš Michal, Šorel Michal, Mangová M., Rajmic P., Standara M., Jiřík Radovan: DCE-MRI Perfusion Analysis with L1-Norm Spatial Regularization, Joint Annual Meeting ISMRM-ESMRMB 2018. Book of Absdtracts. [2018]
Vydra J., Daneš J., Bartoš Michal, Šroubek Filip, Petr L., Zitová Barbara: Metodika ultrazvukového vyšetření prsou (2017) Download [2017]
Šroubek Filip, Schier Jan, Bartoš Michal, Zitová Barbara: Software pro sledování pohybu UZ sondy (2017) Download [2017]
Šroubek Filip, Bartoš Michal, Zitová Barbara, Daneš J., Lambert L., Vydra J.: Breast ultrasound examination: 3D-enhanced tool for precise analysis, Proceedings of the AIMed 2017 Download [2017]
Bílková Zuzana, Bartoš Michal, Schier Jan, Šroubek Filip, Zitová Barbara, Vydra J., Daneš J.: Evaluating Spatial Coverage of Breast Examination with Free-hand Ultrasound Transducer, BISTEC 2017 10th International Joint Conference on Biomedical Engineering Systems and Technologies, p. 128-133, Eds: Silveira Margarida, Fred Ana, Gamboa Hugo, Vaz Mário Download DOI: 10.5220/0006249101280133 [2017]
Šorel Michal, Bartoš Michal: Efficient JPEG decompression by the alternating direction method of multipliers, Proceedings of the 23rd International Conference on Pattern Recognition (ICPR), p. 271-276 Download DOI: 10.1109/ICPR.2016.7899645 [2016]
Kratochvíla Jiří, Jiřík Radovan, Starčuk jr. Zenon, Bartoš Michal, Standara M., Taxt T.: Using multichannel blind AIF estimation with the DCATH model to allow increased temporal sampling interval in DCE-MRI, Magma Download [2016]
Zitová Barbara, Šroubek Filip, Kamenický Jan, Kotera Jan, Šorel Michal, Bartoš Michal, Flusser Jan, Šíma Z., Švarc P., Hořínek J.: Forensics image and video restoration, Abstract book of 7th European Academy of Forensic Science Conference Download [2015]
Šroubek Filip, Bartoš Michal, Zitová Barbara, Schier Jan, Boldyš Jiří, Vydra J., Daneš J.: Softwarový modul projektu SONO (2014) Download [2014]
Zitová Barbara, Šroubek Filip, Flusser Jan, Kamenický Jan, Novozámský Adam, Mahdian Babak, Bartoš Michal, Saic Stanislav, Zita Aleš, Šorel Michal, Kotera Jan: PIZZARO - Prostředky pro identifikaci obrazového záznamového zařízení, autentifikaci a rekonstrukci obrazu (2014) Download [2014]
Jiřík Radovan, Souček Karel, Mézl M., Bartoš Michal, Dražanová Eva, Dráfi F., Krátká Lucie, Kratochvíla J., Macíček O., Nylund K., Hampl A., Gilja O.H., Taxt T., Starčuk jr. Zenon: Blind Deconvolution in Dynamic Contrast-Enhanced MRI and Ultrasound, Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE. Proceedings, p. 4276-4279 DOI: 10.1109/EMBC.2014.6944569 [2014]